Modeling neuron-glia interactions with the Brian 2 simulator
Stimberg M, Goodman DFM, Brette R, De Pittà M
Springer
(2019)
In: Computational Glioscience. De Pittà M, Berry H (eds)
In: Computational Glioscience. De Pittà M, Berry H (eds)
Abstract
Despite compelling evidence that glial cells could crucially regulate neural network activity, the vast majority
of available neural simulators ignores the possible contribution of glia to neuronal physiology. Here, we show
how to model glial physiology and neuron-glia interactions in the Brian 2 simulator. Brian 2 offers facilities to
explicitly describe any model in mathematical terms with limited and simple simulator-specific syntax,
automatically generating high-performance code from the user-provided descriptions. The flexibility of this
approach allows us to model not only networks of neurons, but also individual glial cells, electrical coupling of
glial cells, and the interaction between glial cells and synapses. We therefore conclude that Brian 2 provides an
ideal platform to efficiently simulate glial physiology, and specifically, the influence of astrocytes on neural
activity.
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